Ruiz Lab

Why do fat cells keep filling?

Built to store, pushed to overflow.

Fat cells evolved to bank energy for lean times. Surrounded by constant food, and by the sugar-modified proteins of processed diets, they keep filling. We study the genes, proteins and lipids that decide how much a fat cell holds, and how the brain steers it.


One cell

One fat cell at a time.

We are a metabolism lab at New York Tech asking what changes inside adipocytes as they swell with fat, and how the brain and processed food push them there.

A mature adipocyte keeps its fat in one large lipid droplet. As the droplet grows it fills most of the cell and presses the nucleus flat against the membrane.

Three questions organize the lab. The receptor pathway behind the second led us to the gene behind the first, and the third asks whether the same chemistry reaches the brain. GLP-1 drugs can shrink fat stores, but most people regain the weight when they stop. Treatments that last need a better map of what drives storage inside the cell.

  1. 02Accumulation
  2. 03Glycation
  3. 04Regulation

Accumulation

Zfp949 loweredControlZfp949 raised

What tells a fat cell to keep filling?

Fat tissue grows mostly by hypertrophy: existing adipocytes swell with triglyceride. The steps that let a cell keep adding lipid are still largely unknown, partly because hypertrophied adipocytes cannot be isolated from a living person to study.

When we lowered the zinc finger protein Zfp949 in adipocytes, the cells stored significantly more triglyceride than controls throughout differentiation. Zfp949 had only been described as a transcriptional suppressor during embryonic development. We think it holds back the genes and proteins that drive lipid buildup, and that raising it could protect cells from hypertrophy.

With RNA sequencing, proteomics and lipidomics, we are mapping what changes when Zfp949 falls, and testing whether overexpressing it is a route to preventing or treating obesity.

Grant R03 DK138218 on NIH RePORTER

Glycation

Is a receptor built to help us store fat now driving obesity?

Advanced glycation end products (AGEs) form when sugars react with proteins and fats. Highly processed foods are rich in them, and the body makes more when blood sugar runs high. AGEs signal through RAGE, a receptor on adipocytes, and its intracellular partner DIAPH1.

At NYU, Dr. Ruiz and colleagues found that high AGE levels disrupt glucose metabolism and that RAGE tracks with lipid accumulation and obesity in mice and in human tissue. In people with obesity, the AGE/RAGE/DIAPH1 axis was tied to insulin-resistance risk in subcutaneous fat but not in omental fat. The work points to RAGE as a lipid-storage mechanism that helped in lean times and works against us when food is always available.

Mice lacking DIAPH1 in their fat resisted diet-induced obesity and carried more Zfp949. That result started the Zfp949 project.

Read the review in Endocrinology, 2020

Regulation

Do AGEs in the brain cause insulin resistance and feed Alzheimer’s disease?

The hypothalamus helps set how the body handles glucose and fat.

At the Icahn School of Medicine at Mount Sinai, Dr. Ruiz showed that mice engineered to model Alzheimer’s disease were more prone to metabolic dysregulation, with impaired insulin signaling in the hypothalamus and elevated branched-chain amino acids. The results suggest that Alzheimer’s disease and diabetes can drive each other.

Later, at NYU, he found that AGEs build up in brains affected by Alzheimer’s disease. The lab now asks whether those AGEs cause insulin resistance and impaired glucose metabolism, and whether that helps trigger or worsen the disease.

Read the study in Alzheimer’s & Dementia, 2016

The result

“The difference was so striking that, at first, I figured something was wrong.”

Henry Ruiz, on the first time adipocytes with less Zfp949 filled with fat. The experiment was repeated several times with the same result.

New York Tech News, June 2025

Publications

  1. Sex differences in murine MASH induced by a fructose-palmitate-cholesterol-enriched diet JHEP Reports Arivazhagan L, Delbare S, … Ruiz HH, et al.
  2. The RAGE/DIAPH1 axis: mediator of obesity and proposed biomarker of human cardiometabolic disease Cardiovascular Research Arivazhagan L, Popp CJ, Ruiz HH, et al.
  3. Central Regulation of Branched-Chain Amino Acids Is Mediated by AgRP Neurons Diabetes Gannaban RB, NamKoong C, Ruiz HH, et al.
  4. A Receptor of the Immunoglobulin Superfamily Regulates Adaptive Thermogenesis Cell Reports Hurtado Del Pozo C, Ruiz HH, Arivazhagan L, et al.
  5. Metabolism, Obesity, and Diabetes Mellitus Arteriosclerosis, Thrombosis, and Vascular Biology Ruiz HH, López Díez R, Arivazahagan L, et al.
  6. Behavioral and neuroanatomical abnormalities in pleiotrophin knockout mice PLOS ONE Krellman JW, Ruiz HH, Marciano VA, et al.

All publications on Google Scholar


People

Henry H. Ruiz, PhD, standing in a New York Tech classroom

Henry H. Ruiz, PhD

Assistant Professor, Department of Biological & Chemical Sciences, College of Arts & Sciences, New York Institute of Technology

Dr. Ruiz trained as a behavioral neuroscientist at Queens College and the Graduate Center of the City University of New York, where he earned an M.Phil. in behavioral neuroscience and a Ph.D. in neuropsychology. He studied neurotransmitters in colitis at Regeneron Pharmaceuticals and held research positions at the Icahn School of Medicine at Mount Sinai and at NYU before joining New York Tech in 2024.

He came to the United States from Colombia. His Queens College lab mentors guided him through academia the way college-educated relatives guided other students, and mentoring is now central to how he runs his own lab. He teaches BIOL 110 and BIOL 456.

  • Keystone Symposia Fellow, 2023
  • NIH/NIDDK Research Scientist Career Development Award (K01), 2020
  • American Heart Association Obesity Fellow, 2018–2020